| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Cape Howe | Sea/Bay/Gulf | native | 75154 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 5978 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 75154 |
| Indian Ocean | Sea/Bay/Gulf | native | 13203 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| North Australian Shelf | Sea/Bay/Gulf | native | 5978 |
| Pacific Ocean | Sea/Bay/Gulf | native | 5978 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Tweed-Moreton | Sea/Bay/Gulf | native | 75154 |