| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Indian Ocean | Sea/Bay/Gulf | native | 2745 |
| Indonesian Sea | Sea/Bay/Gulf | native | 8631 |
| North Australian Shelf | Sea/Bay/Gulf | native | 5278 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 5278 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 5278 |
| Pacific Ocean | Sea/Bay/Gulf | native | 5278 |
| Panay Gulf | Sea/Bay/Gulf | native | 42831 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45334 |
| Shark Bay | Sea/Bay/Gulf | native | 115274 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 130287 |
| Verde Island Passage | Sea/Bay/Gulf | native | 37603 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 115274 |
| West Philippine Sea | Sea/Bay/Gulf | native | 48613 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |