| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agnébi | River (basin) | native | 13331 |
| Ankobra | River (basin) | native | 57403 |
| Atlantic Ocean | Sea/Bay/Gulf | native | 4343 |
| Bandama | River (basin) | native | 57403 |
| Canary Current | Sea/Bay/Gulf | native | 4343 |
| Chiloango | River (basin) | native | 120641 |
| Comoé | River (basin) | native | 13331 |
| Corubal | River (basin) | native | 57403 |
| Densu | River (basin) | native | 57403 |
| Ébrié | Lagoon | native | 28587 |
| Ethiopian | Zoogeographic realm | native | 57403 |
| Fatala | River (basin) | native | 57403 |
| Gambia | River (basin) | native | 13331 |
| Géba | River (basin) | native | 57403 |
| Great Scarcies | River (basin) | native | 57403 |
| Kogon | River (basin) | native | 57403 |
| Kunene | River (basin) | native | 33857 |
| Mono | River (basin) | native | 57403 |
| Niger | River (basin) | native | 57403 |
| Niger Delta | River (basin) | native | 57403 |
| Ouémé | River (basin) | native | 57403 |
| Pampana | River (basin) | native | 57403 |
| Pra | River (basin) | native | 57403 |
| Rokel | River (basin) | native | 57403 |
| San Pedro | River (basin) | native | 57403 |
| Sanaga | River (basin) | native | 51193 |
| Senegal | River (basin) | native | 13331 |
| Upper Niger | River (basin) | native | 57403 |
| Volta | River (basin) | native | 57403 |